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Computational Biology: Genomes, Networks, Evolution >> Content Detail


Table of Contents



Assignments



Assignments

Special software is required to use some of the files in this section: .py.

A programming component was included in several of the problem sets. For those problem sets, data sets were given and the students were asked to implement their algorithms using python. To learn more about python, you can visit their Web site.


ASSIGNMENTSSUPPORTING FILES
Problem Set 1 (PDF)allinter.txt (TXT)
allintercons.txt (TXT)
Yeast_known_motifs.txt (TXT)
Yeast Motif Functions (PDF)
Template Code: ps1temp.py (PY)
Problem Set 2 (PDF)
Problem Set 3 (PDF)gibbs.py (PY)
data1.txt (TXT)
data2.txt (TXT)
data3.txt (TXT)
data4.txt (TXT)
Problem Set 4 (PDF)
Problem Set 5 (PDF)K. Waltii Sequence: Kwal.fasta.txt (TXT)
S. Cerevisiae Sequence: Scer.fasta.txt (TXT)

 








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