Module 1: Size and Components of Cells and Implications with respect to Regulation |
L1 | Introduction: cell constituents, prokaryotes vs. eukaryotes (PDF) |
L2 | Introduction (cont'd) (PDF) |
Module 2: Fatty Acid Synthases (FAS), Polyketide Synthases (PKS), and Non-ribosomal Polypeptide Synthases (NRPS) |
L3 | Fatty Acid Synthase: polymerization, biosynthesis, players, chemistry, structure, chemistry as a paradigm for PKS and NRPS, medical interlude (PDF) |
L4 | Experimental methods for elucidating FAS structure (PDF) |
L5 | Chemistry of FAS as paradigm for other molecular machines (PDF) |
L6 | Secondary metabolism: PKS, NRPS (PDF) |
L7 | Chemistry of PKS and NRPS: post-translational modification, initiation, elongation, decoration, termination, fidelity (PDF) |
L8 | Chemistry of PKS and NRPS (cont'd) (PDF) |
L9 | Chemistry of PKS and NRPS (cont'd with specific examples) (PDF) |
L10 | Biosynthesis of yersiniabactin and cholesterol (PDF) |
L11 | Cholesterol biosynthesis (PDF) |
L12 | Cholesterol regulation and homeostasis (PDF) |
L13 | Sensing insoluble molecules (PDF) |
L14 | Module 2: Regulation of the transcription level by insoluble metabolites and Module 3: Translation (PDF) |
Module 3: Translation: Loading, Initiation, Elongation, and Termination - A Machine in Action; Introduction to G-proteins: Switches or Motors |
L15 | Translation (cont'd) (PDF) |
L16 | Elongation, termination, RNA polymerase (PDF) |
L17 | Chemical methods for studying translation and the ribosome (PDF) |
L18 | Chemical methods for studying translation and the ribosome (cont'd) (PDF) |
L19 | Chemical methods for studying translation and the ribosome (cont'd) (PDF) |
L20 | Isoleucine tRNA synthetase (PDF) |
L21 | tRNA synthase editing mechanisms; G proteins (EF-Tu/EF-G) (PDF) |
L22 | G proteins: motors (PDF) |
L23 | G proteins: switches (PDF) |
L24 | Peptide bond formation; new technologies using the ribosome (PDF) |
L25 | Module 3: methods for the incorporation of unnatural amino acids and Module 4: what happens as a protein exits the ribosome? (PDF) |
Module 4: Crypts and Chambers: Macromolecular Machines involved in Protein Folding and Degradation |
L26 | Protein folding in vitro (PDF) |
L27 | Protein folding: in vitro vs. in vivo; degradation (PDF) |
L28 | Protein folding in vivo (PDF) |
L29 | Chaperone proteins (PDF) |
L30 | GroEL/GroES (PDF) |
L31 | Proteases (PDF) |
L32 | Proteosome (PDF) |
L33 | Proteosome (cont'd) (PDF) |
L34 | Role of Ubiquitin in degradation (PDF) |
L35 | Degradation through polyubiquitination (PDF) |